Topic areas: original research articles describing single gene function studies and large scale forward genetics screens; characterisation of EST collections; full and partial genome annotation; protein-protein interaction mapping; inter-comparison of specific gene mutants within and between species; bioinformatics analysis; other databases on interactions and review articles.
2024
Bhagat, N. et al, (2024). Molecular warfare between pathogenic
Fusarium oxysporum R1 and host
Crocus sativus L. unraveled by dual transcriptomics.
Plant Cell Reports doi:
10.1007/s00299-023-03101-x.
de Oliveira, T. C. et al, (2024). Unraveling the transcriptional features and gene expression networks of pathogenic and saprotrophic
Ophiostoma species during the infection of
Ulmus americana.
Microbiology Spectrum doi:
10.1128/spectrum.03694-23.
Medina, R. et al, (2024). Genome analysis of three isolates of
Stemphylium lycopersici differ in their virulence and sporulation ability: Identification of effectors, pathogenesis and virulence factors.
Plant Pathol. doi:
10.1111/ppa.13878.
Rutherford, K. M. et al, (2024). PomBase: a Global Core Biodata Resource-growth, collaboration, and sustainability.
Genetics doi:
10.1093/genetics/iyae007.
Yuan, C. et al, (2024). Genomic analysis of
Ralstonia pickettii reveals the genetic features for potential pathogenicity and adaptive evolution in drinking water.
Frontiers in Microbiology doi:
10.3389/fmicb.2023.1272636.
2023
Arias, R. S. et al, (2023). First draft genome and transcriptome of
Cercosporidium personatum, causal agent of late leaf spot disease of peanut.
BMC Res. Notes doi:
10.1186/s13104-023-06331-0.
Asif, M. et al, (2023). Comprehensive genomic analysis of
Bacillus paralicheniformis strain BP9, pan-genomic and genetic basis of biocontrol mechanism.
Comp. Struct. Biotechnol. J.. doi:
10.1016/j.csbj.2023.09.043.
Baltazar, E. et al, (2023). Morphological, molecular and genomic identification and characterisation of
Monilinia fructicola in
Prunus persica from Portugal.
Agronomy doi:
10.3390/agronomy13061493.
Bao, J. et al, (2023). High-quality genome assembly and annotation resource of
Elsinoe annonae, causing fruit scab on
Camellia oleifera.
Plant Dis. doi:
10.1094/PDIS-10-22-2322-A.
Bishnoi, R. et al, (2023). Genome engineering of disease susceptibility genes for enhancing resistance in plants.
Funct. Integr. Genomics doi:
10.1007/s10142-023-01133-w.
Bouqellah, N. A. et al, (2023). Secretome analysis for a new strain of the Blackleg fungus
Plenodomus lingam reveals candidate proteins for effectors and virulence factors.
J. Fungi doi:
10.3390/jof9070740.
Bouqellah, N. A.P. F. Farag, (2023). In silico evaluation, phylogenetic analysis, and structural modeling of the Class II hydrophobin family from different fungal phytopathogens.
Microorganisms doi:
10.3390/microorganisms11112632.
Cai, J. et al, (2023). Whole genome sequencing and analysis of
Armillaria gallica Jzi34 symbiotic with
Gastrodia elata.
BMC Genomics doi:
10.1186/s12864-023-09384-4.
Carreon-Anguiano, K. G. et al, (2023).
Pseudocercospora fijiensis conidial germination is dominated by pathogenicity factors and effectors.
J. Fungi doi:
10.3390/jof9100970.
Chellappan, B. V. et al, (2023). In silico characterization of the secretome of the fungal pathogen
Thielaviopsis punctulata, the causal agent of date palm Black Scorch Disease.
J. Fungi doi:
10.3390/jof9030303.
Chen, X. et al, (2023). Genomic and transcriptomic survey provides insights into molecular basis of pathogenicity of the sunflower pathogen
Phoma macdonaldii.
J. Fungi doi:
10.3390/jof9050520.
Chen, Z. et al, (2023).
Kosakonia radicincitans with hypervirulent lON genes causes human bloodstream infections.
Future Microbiol doi:
10.2217/fmb-2022-0190.
D'Angelo, E. M., (2023). Diversity of virulence and antibiotic resistance genes expressed in Class A biosolids and biosolids-amended soil as revealed by metatranscriptomic analysis.
Lett. Appl. Microbiol. doi:
10.1093/lambio/ovad097.
Dauda, W. P. et al, (2023). Biocontrol of sheath blight of rice (
Oryza sativa L.) through alteration in expression dynamics of candidate effector genes of
Rhizoctonia solani AG1-IA during pathogenesis.
Lett. Appl. Microbiol. doi:
10.1093/lambio/ovac008.
Deng, L. et al, (2023). Genome sequence and evaluation of safety and probiotic potential of
Lactiplantibacillus plantarum LPJZ-658.
Microorganisms doi:
10.3390/microorganisms11061620.
Du, Y. et al, (2023). Pathogenicity analysis and comparative genomics reveal the different infection strategies between the generalist
Metarhizium anisopliae and the specialist
Metarhizium acridum.
Pest Manag Sci doi:
10.1002/ps.7812.
Du, Y. et al, (2023). Pan-chromosome and comparative analysis of
agrobacterium fabrum reveal important traits concerning the genetic diversity, evolutionary dynamics, and niche adaptation of the species.
Microbiol Spectr doi:
10.1128/spectrum.02924-22.
Duan, Y. N. et al, (2023). Genome sequence resource of
Fusarium proliferatum f. sp.
malus domestica MR5, the causative agent of apple replant disease.
Plant Dis. doi:
10.1094/PDIS-06-22-1352-A.
Escobar-Nino, A. et al, (2023). The adaptation of
Botrytis cinerea extracellular vesicles proteome to surrounding conditions: revealing new tools for its infection process.
J. Fungi doi:
10.3390/jof9090872.
Feng, C. Y. et al, (2023).
Telluribacter roseus sp. nov., isolated from the Kumtag desert soil.
Curr Microbiol doi:
10.1007/s00284-023-03484-w.
Francis, A. et al, (2023). Evolution of pathogenicity-associated genes in
Rhizoctonia solani AG1-IA by genome duplication and transposon-mediated gene function alterations.
BMC Biol. doi:
10.1186/s12915-023-01526-0.
Granados-Casas, A. O. et al, (2023). Hybrid de novo whole-genome assembly, annotation, and identification of secondary metabolite gene clusters in the ex-type strain of
Chrysosporium keratinophilum.
J. Fungi doi:
10.3390/jof9040389.
Guo, H. et al, (2023). Preliminary analysis of transcriptome response of
Dioryctria sylvestrella (Lepidoptera: Pyralidae) larvae infected with
Beauveria bassiana under short-term starvation.
Insects doi:
10.3390/insects14050409.
Guo, J. et al, (2023). The completed genome sequence of
Pestalotiopsis versicolor, a pathogenic ascomycete fungus with implications for bayberry production.
Genomics doi:
10.1016/j.ygeno.2023.110695.
Gupta, Y. K. et al, (2023). Major proliferation of transposable elements shaped the genome of the soybean rust pathogen
Phakopsora pachyrhizi.
Nat Commun doi:
10.1038/s41467-023-37551-4.
Gurjar, M. S. et al, (2023). Draft genome sequencing of
Tilletia caries inciting common bunt of wheat provides pathogenicity-related genes.
Front Microbiol doi:
10.3389/fmicb.2023.1283613.
Gutierrez-Sanchez, A. et al, (2023). Virulence factors of the genus
Fusarium with targets in plants.
Microbiol Res doi:
10.1016/j.micres.2023.127506.
Han, H. et al, (2023).
BcTaf14 regulates growth and development, virulence, and stress responses in the phytopathogenic fungus
Botrytis cinerea.
Mol Plant Pathol doi:
10.1111/mpp.13331.
Han, J. R. et al, (2023).
Rubellimicrobium arenae sp. nov., isolated from desert soil.
Int. J. Syst. Evol. Microbiol. doi:
10.1099/ijsem.0.005990.
Harrison, P. W. et al, (2023). Ensembl 2024.
Nucleic Acids Res doi:
10.1093/nar/gkad1049.
Haveman, N. J. et al, (2023). Advancing the automation of plant nucleic acid extraction for rapid diagnosis of plant diseases in space.
Front Plant Sci doi:
10.3389/fpls.2023.1194753.
He, K. et al, (2023). The chromosome-scale genomes of
Exserohilum rostratum and
Bipolaris zeicola pathogenic fungi causing rice spikelet rot disease.
J. Fungi doi:
10.3390/jof9020177.
He, Y. et al, (2023). Multiomics analysis reveals the molecular mechanisms underlying virulence in
Rhizoctonia and jasmonic acid-mediated resistance in
Tartary buckwheat (Fagopyrum tataricum).
Plant Cell doi:
10.1093/plcell/koad118.
Hu, Z. et al, (2023). Excessive disinfection aggravated the environmental prevalence of antimicrobial resistance during COVID-19 pandemic.
Sci Total Environ doi:
10.1016/j.scitotenv.2023.163598.
Hui, C. et al, (2023). Microbial contamination risk of landfilled waste with different ages.
Waste Manage. doi:
10.1016/j.wasman.2023.09.021.
Jayaprakash, A. et al, (2023). Understanding the mechanism of pathogenicity through interactome studies between
Arachis hypogaea L. and
Aspergillus flavus.
J Proteomics doi:
10.1016/j.jprot.2023.104975.
Jin, P. et al, (2023). Comparative genomics and transcriptome analysis reveals potential pathogenic mechanisms of
Microdochium paspali on seashore paspalum.
Front Microbiol doi:
10.3389/fmicb.2023.1259241.
Joshi, A. et al, (2023). Integrated molecular and bioinformatics approaches for disease-related genes in plants.
Plants (Basel) doi:
10.3390/plants12132454.
Kaladhar, V. C. et al, (2023). A small cysteine-rich fungal effector,
BsCE66 is essential for the virulence of
Bipolaris sorokiniana on wheat plants.
Fungal Genet Biol doi:
10.1016/j.fgb.2023.103798.
Koyyada, P.S. Mishra, (2023). A systematic computational analysis of
Mycobacterium tuberculosis H37Rv and human
CD34+ genomic expression reveals crucial molecular entities involved in infection progression.
J. Biomol. Struct. Dyn. doi:
10.1080/07391102.2023.2175257.
Kronmiller, B. A. et al, (2023). Comparative genomic analysis of 31
Phytophthora genomes reveals genome plasticity and horizontal gene transfer.
Mol Plant Microbe Interact doi:
10.1094/MPMI-06-22-0133-R.
Kushwah, A. S. et al, (2023). Elucidating the zinc-binding proteome of
Fusarium oxysporum f. sp. lycopersici with particular emphasis on zinc-binding effector proteins.
Arch Microbiol doi:
10.1007/s00203-023-03638-1.
Li, H. et al, (2023). Unique microbial landscape in the human oropharynx during different types of acute respiratory tract infections.
Microbiome doi:
10.1186/s40168-023-01597-9.
Li, J. et al, (2023). Draft genome and biological characteristics of
Fusarium solani and
Fusarium oxysporum causing black rot in
Gastrodia elata.
Int. J. Mol. Sci. doi:
10.3390/ijms24054545.
Li, J. et al, (2023). Genome sequence resource of
Cladosporium velox strain C4 causing cotton boll disease in Xinjiang, China.
Plant Dis. doi:
10.1094/PDIS-11-22-2694-A.
Li, R. et al, (2023). Genome sequencing and analysis reveal potential high-valued metabolites synthesized by
Lasiodiplodia iranensis DWH-2.
J. Fungi doi:
10.3390/jof9050522.
Li, S. et al, (2023). Intraspecific comparative analysis reveals genomic variation of
Didymella arachidicola and pathogenicity factors potentially related to lesion phenotype.
Biology-Basel doi:
10.3390/biology12030476.
Li, Y. Y. et al, (2023). The first complete genome resource for the plant-pathogenic fungus
Exobasidium rhododendri.
Phytopathology doi:
10.1094/PHYTO-08-22-0301-A.
Li, Z. et al, (2023). Characteristics of
Epicoccum latusicollum as revealed by genomic and metabolic phenomic analysis, the causal agent of tobacco
Epicoccus leaf spot.
Front Plant Sci doi:
10.3389/fpls.2023.1199956.
Lin, Z. et al, (2023). Genome sequence resource of
Pectobacterium polaris QK413-1 that causes blackleg on potato in Fujian province, China.
Plant Dis. doi:
10.1094/PDIS-08-22-1922-A.
Liu, F. et al, (2023). The completed genome data of the pathogenic fungus
Exobasidium cylindrosporum.
Plant Dis. doi:
10.1094/PDIS-01-22-0208-A.
Liu, Y. et al, (2023). Genome sequence resource of
Ustilago crameri, a fungal pathogen causing millet smut disease of Foxtail Millet.
Plant Dis. doi:
10.1094/PDIS-06-22-1439-A.
Liu, Y. et al, (2023). Genome resource of
Rhizoctonia solani anastomosis group 4 strain AG4-JY, a pathomycete of sheath blight of foxtail millet.
Plant Dis. doi:
10.1094/PDIS-07-22-1542-A.
Liu, Y. Y. et al, (2023). ProbioMinServer: an integrated platform for assessing the safety and functional properties of potential probiotic strains.
Bioinform. Adv. doi:
10.1093/bioadv/vbad153.
Liu, Z. et al, (2023). Characterization and genome analysis of
Cladobotryum mycophilum, the causal agent of cobweb disease of
Morchella sextelata in China.
J. Fungi doi:
10.3390/jof9040411.
Lv, W. Y. et al, (2023). Draft genome sequence of
Colletotrichum fructicola causing leaf spot on tea plants (
Camellia sinensis).
Plant Pathol. doi:
10.1111/ppa.13802.
Maguvu, T. E. et al, (2023). Whole genome sequencing and analysis of multiple isolates of
Ceratocystis destructans, the causal agent of
Ceratocystis canker of almond in California.
Sci Rep doi:
10.1038/s41598-023-41746-6.
Mostaffa, N. H. et al, (2023). Interactomics in plant defence: progress and opportunities.
Mol. Biol. Rep. doi:
10.1007/s11033-023-08345-0.
Muterko, A. et al, (2023). The genome of a Far Eastern isolate of
Diaporthe caulivora, a soybean fungal pathogen.
Appl Microbiol Biotechnol doi:
10.1007/s00253-023-12370-1.
Núñez, A.A. M. García, (2023). The aerobiome in a hospital environment: characterization, seasonal tendencies and the effect of window opening ventilation.
Building and Environment doi:
10.1016/j.buildenv.2023.110024.
Nur, M. et al, (2023). EffectorO: Motif-independent prediction of effectors in oomycete genomes using machine learning and lineage specificity.
Mol Plant Microbe Interact doi:
10.1094/MPMI-11-22-0236-TA.
Otto, M. et al, (2023). Metatranscriptomic analyses of grapes reveal differences in expressed functional genes of filamentous and yeast fungi during noble rot and grey rot.
Fungal Ecology doi:
ARTN 101277.
Pan, J. et al, (2023). Genome sequence resource of
Botryosphaeria dothidea strain XNHG241, a causal agent of peach gummosis.
Plant Dis. doi:
10.1094/PDIS-11-22-2539-A.
Peerapen, P.V. Thongboonkerd, (2023). Protein network analysis and functional enrichment via computational biotechnology unravel molecular and pathogenic mechanisms of kidney stone disease.
Biomed. J. doi:
10.1016/j.bj.2023.01.001.
Prasad, P. et al, (2023). Candidate effectors for leaf rust resistance gene Lr28 identified through transcriptome and in-silico analysis.
Front Microbiol doi:
10.3389/fmicb.2023.1143703.
Qiu, L. et al, (2023). Efflux pumps activation caused by mercury contamination prompts antibiotic resistance and pathogen's virulence under ambient and elevated CO(2) concentration.
Sci Total Environ doi:
10.1016/j.scitotenv.2022.160831.
Rafiei, V. et al, (2023).
Verticillium longisporum phospholipase VlsPLA(2) is a virulence factor that targets host nuclei and modulates plant immunity.
Mol Plant Pathol doi:
10.1111/mpp.13352.
Rai, P. et al, (2023). Fungal effectors versus defense-related genes of
B. juncea and the status of resistant transgenics against fungal pathogens.
Front Plant Sci doi:
10.3389/fpls.2023.1139009.
Ramos-Lizardo, G. N. et al, (2023). A repertoire of candidate effector proteins of the fungus
Ceratocystis cacaofunesta.
Sci Rep doi:
10.1038/s41598-023-43117-7.
Rana, S.S. K. Singh, (2023). Insights into the genomic architecture of a newly discovered endophytic Fusarium species belonging to the
Fusarium concolor complex from India.
Front Microbiol doi:
10.3389/fmicb.2023.1266620.
Rozano, L. et al, (2023). Template-based modelling of the structure of fungal effector proteins.
Mol. Biotechnol. doi:
10.1007/s12033-023-00703-4.
Rozano, L. et al, (2023). Ab initio modelling of the structure of ToxA-like and MAX fungal effector proteins.
Int. J. Mol. Sci. doi:
10.3390/ijms24076262.
Seong, K.K. V. Krasileva, (2023). Prediction of effector protein structures from fungal phytopathogens enables evolutionary analyses.
Nat Microbiol doi:
10.1038/s41564-022-01287-6.
Shi, W. J. et al, (2023). Complete genome analysis of pathogenic
Metschnikowia bicuspidata strain MQ2101 isolated from diseased ridgetail white prawn,
Exopalaemon carinicauda.
BMC Microbiol doi:
10.1186/s12866-023-02865-2.
Si, H. et al, (2023). The effects of co-culture on the expression of selected PKS genes in the lichenized fungus
Xanthoparmelia taractica.
Mycol. Prog. doi:
10.1007/s11557-023-01894-5.
Singh, S. et al, (2023). Unraveling the role of effector proteins in
Bipolaris oryzae infecting North East Indian rice cultivars through time-course transcriptomics analysis.
Fungal Biol. doi:
10.1016/j.funbio.2023.05.003.
Solano-Gonzalez, S. et al, (2023). Genomic characterization and functional description of
Beauveria bassiana isolates from Latin America.
J. Fungi doi:
10.3390/jof9070711.
Srivastava, A. K. et al, (2023). Virulence and pathogenicity determinants in whole genome sequence of
Fusarium udum causing wilt of pigeon pea.
Front Microbiol doi:
10.3389/fmicb.2023.1066096.
Sun, Y. et al, (2023).
Curtanaerobium respiraculi gen. nov., sp. nov., a novel anaerobic bacterium isolated from human bronchoalveolar lavage fluid.
Int. J. Syst. Evol. Microbiol. doi:
10.1099/ijsem.0.005864.
Swanepoel, S. et al, (2023). The in planta gene expression of Austropuccinia psidii in resistant and susceptible
Eucalyptus grandis.
Phytopathology doi:
10.1094/PHYTO-07-22-0257-R.
Thakur, N. et al, (2023). Marburg virus outbreak and a new conspiracy theory: Findings from a comprehensive analysis and forecasting of web behavior.
Computation doi:
ARTN 234 10.3390/computation11110234.
Thakur, N. et al, (2023). A large-scale dataset of search interests related to disease x originating from different geographic regions.
Data doi:
ARTN 163 10.3390/data8110163.
Tian, L. et al, (2023). Taxonomic description and complete genome sequencing of
Pseudomonas silvicola sp. nov. isolated from
Cunninghamia laceolata.
Forests doi:
10.3390/f14061089.
Tsers, I. et al, (2023). First genome-scale insights into the virulence of the snow mold causal fungus
Microdochium nivale.
IMA Fungus doi:
10.1186/s43008-022-00107-0.
Tu, Q. et al, (2023). Comparative transcriptomics identifies the key in planta-expressed genes of
Fusarium graminearum during infection of wheat varieties.
Front Genet doi:
10.3389/fgene.2023.1166832.
Turco, S. et al, (2023). Hybrid de novo genome assembly and comparative genomics of three different isolates of
Gnomoniopsis castaneae.
Sci Rep doi:
10.1038/s41598-023-30496-0.
Vo, K. T. X. et al, (2023). Engineering effector-triggered immunity in rice: obstacles and perspectives.
Plant Cell Environ. doi:
10.1111/pce.14477.
Wang, T. et al, (2023). Genomic sequence resource of
Talaromyces albobiverticillius, the causative pathogen of pomegranate pulp rot disease.
J. Fungi doi:
10.3390/jof9090909.
Wang, T. et al, (2023). Combined effects of host genetics and diet on porcine intestinal fungi and their pathogenic genes.
Front Microbiol doi:
10.3389/fmicb.2023.1192288.
Wei, C. et al, (2023). Metagenomics revealing molecular profiles of microbial community structure and metabolic capacity in Bamucuo lake, Tibet.
Environ. Res. doi:
10.1016/j.envres.2022.114847.
Wu, M. et al, (2023). SVep1, a temperate phage of human oral commensal
Streptococcus vestibularis.
Front Microbiol doi:
10.3389/fmicb.2023.1256669.
Wu, Y. et al, (2023). A whole-genome assembly for
Hyaloperonospora parasitica, a pathogen causing downy mildew in cabbage (
Brassica oleracea var. capitata L.).
J. Fungi doi:
10.3390/jof9080819.
Xia, H. et al, (2023). Genome sequence resource for
Phytopythium helicoides, the causal pathogen of crown and root rot of
Photinia x fraseri.
Plant Dis. doi:
10.1094/PDIS-12-22-2942-A.
Xie, Y. et al, (2023). Host recognition and specific infection of
Endomelanconiopsis endophytica during early infection.
J. Fungi doi:
10.3390/jof9101040.
Xu, X. J. et al, (2023). Differences of gut microbiota and behavioral symptoms between two subgroups of autistic children based on gammadeltaT cells-derived IFN-gamma Levels: a preliminary study.
Front Immunol doi:
10.3389/fimmu.2023.1100816.
Xue, Z. et al, (2023). The hidden diversity of microbes in ballast water and sediments revealed by metagenomic sequencing.
Sci Total Environ doi:
10.1016/j.scitotenv.2023.163666.
Yan, C. et al, (2023). Whole genome sequence of
Cryptosphaeria pullmanensis, an important pathogenic fungus potentially threatening crop and forestry production.
Genomics doi:
10.1016/j.ygeno.2023.110576.
Yan, K. et al, (2023). Diffusion and enrichment of high-risk antibiotic resistance genes (ARGs) via the transmission chain (mulberry leave, guts and feces of silkworm, and soil) in an ecological restoration area of manganese mining, China: Role of heavy metals.
Environ. Res. doi:
10.1016/j.envres.2023.115616.
Yang, J. et al, (2023). High-quality genome assembly of
Verticillium dahliae VD991 allows for screening and validation of pathogenic genes.
Front Microbiol doi:
10.3389/fmicb.2023.1177078.
Yang, J. et al, (2023). Whole-genome sequencing of Fusarium oxysporum f. sp. cucumerinum strain race-4 infecting cucumber in China.
Plant Dis. doi:
10.1094/PDIS-08-22-1815-A.
Yang, J. et al, (2023). Identification, culture characteristics and whole-genome analysis of
Pestalotiopsis neglecta causing black spot blight of
Pinus sylvestris var. mongolica.
J. Fungi doi:
10.3390/jof9050564.
Yang, X. et al, (2023). Antifungal activity and potential action mechanism of allicin against
Trichosporon asahii.
Microbiol Spectr doi:
10.1128/spectrum.00907-23.
Yao, B. et al, (2023). Diverse virulence attributes of
Pantoea alfalfae sp. nov. CQ10 responsible for bacterial leaf blight in alfalfa revealed by genomic analysis.
Int. J. Mol. Sci. doi:
10.3390/ijms24098138.
Yue, Z. et al, (2023). Combined virome analysis and metagenomic sequencing to reveal the viral communities and risk of virus-associated antibiotic resistance genes during composting.
J Hazard Mater doi:
10.1016/j.jhazmat.2023.132088.
Zhang, Q. et al, (2023). Metagenomic Insight into the global dissemination of the antibiotic resistome.
Adv. Sci. doi:
10.1002/advs.202303925.
Zhang, S. et al, (2023). Reforestation substantially changed the soil antibiotic resistome and its relationships with metal resistance genes, mobile genetic elements, and pathogens.
J. Environ. Manage. doi:
10.1016/j.jenvman.2023.118037.
Zhang, Y. et al, (2023). Genomic characterization of
Pantoea anthophila strain UI705 causing urinary tract infections in China.
Front. Cell. Infect. Microbiol. doi:
10.3389/fcimb.2023.1208473.
Zhang, Y. et al, (2023). Molecular docking and dynamics of a dextranase derived from
Penicillium cyclopium CICC-4022.
Int. J. Biol. Macromol. doi:
10.1016/j.ijbiomac.2023.126493.
Zhao, E. et al, (2023). A relationship prediction method for
Magnaporthe oryzae-rice multi-omics data based on WGCNA and Graph Autoencoder.
J. Fungi doi:
10.3390/jof9101007.
Zhao, X. et al, (2023). Fus3/Kss1-MAP kinase and Ste12-like control distinct biocontrol-traits besides regulation of insect cuticle penetration via phosphorylation cascade in a filamentous fungal pathogen.
Pest Manag Sci doi:
10.1002/ps.7446.
Zhao, Y. et al, (2023). Application of high-throughput sequencing technologies and analytical tools for pathogen detection in urban water systems: progress and future perspectives.
Sci Total Environ doi:
10.1016/j.scitotenv.2023.165867.
Zhou, D. D. et al, (2023).
Tropicibacter oceani sp. nov., a novel sulfur-metabolizing bacteria isolated from the intertidal zone sediment of Chinese Yellow Sea.
Antonie Van Leeuwenhoek doi:
10.1007/s10482-023-01890-5.
Zhu, L. et al, (2023). High-quality genome and annotation resource of orange pink rot pathogen
Trichothecium roseum strain YXFP-22015 isolated from Hubei, China.
Plant Dis. doi:
10.1094/PDIS-10-22-2403-A.
Zhu, Y. et al, (2023). Dual transcriptome analysis reveals that ChATG8 is required for fungal development, melanization and pathogenicity during the interaction between
Colletotrichum higginsianum and
Arabidopsis thaliana.
Int. J. Mol. Sci. doi:
10.3390/ijms24054376.
2022
Amos, B. et al, (2022). VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center.
Nucleic Acids Res doi:
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